Installation
The R software for running longevityTools
can be downloaded from CRAN. The longevityTools
package can be installed from the R console using the following biocLite
install command.
source("http://bioconductor.org/biocLite.R") # Sources the biocLite.R installation script
biocLite("tgirke/longevityTools", build_vignettes=FALSE, dependencies=FALSE) # Installs package from GitHub
Loading package and documentation
library("longevityTools") # Loads the package
library(help="longevityTools") # Lists package info
vignette("longevityTools") # Opens vignette
GitHub workflow
git clone git@github.com:tgirke/longevityTools.git
cd longevityTools
git pull # Get updates from remote
git branch # Check whether you are in the master branch
## do some work, commit/push changes to local and remote ##
git commit -am "some edits"; git push -u origin master
Building and checking package
R CMD build longevityTools # Run from parent directory of longevityTools directory
R CMD check longevityTools_1.0.3.tar.gz
install.package("longevityTools_1.0.3.tar.gz", repos=NULL, type="source")