## R version 3.4.0 (2017-04-21)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Ubuntu 14.04.5 LTS
##
## Matrix products: default
## BLAS: /usr/lib/libblas/libblas.so.3.0
## LAPACK: /usr/lib/lapack/liblapack.so.3.0
##
## locale:
## [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=en_US.UTF-8
## [4] LC_COLLATE=en_US.UTF-8 LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
## [7] LC_PAPER=en_US.UTF-8 LC_NAME=C LC_ADDRESS=C
## [10] LC_TELEPHONE=C LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
##
## attached base packages:
## [1] stats4 parallel methods stats graphics utils datasets grDevices base
##
## other attached packages:
## [1] ape_4.1 ggplot2_2.2.1 systemPipeR_1.10.0
## [4] ShortRead_1.34.0 GenomicAlignments_1.12.0 SummarizedExperiment_1.6.0
## [7] DelayedArray_0.2.0 matrixStats_0.52.2 Biobase_2.36.0
## [10] BiocParallel_1.10.0 Rsamtools_1.28.0 Biostrings_2.44.0
## [13] XVector_0.16.0 GenomicRanges_1.28.0 GenomeInfoDb_1.12.0
## [16] IRanges_2.10.0 S4Vectors_0.14.0 BiocGenerics_0.22.0
## [19] BiocStyle_2.4.0
##
## loaded via a namespace (and not attached):
## [1] edgeR_3.18.0 splines_3.4.0 latticeExtra_0.6-28 RBGL_1.52.0
## [5] GenomeInfoDbData_0.99.0 yaml_2.1.14 Category_2.42.0 RSQLite_1.1-2
## [9] backports_1.0.5 lattice_0.20-35 limma_3.32.0 digest_0.6.12
## [13] RColorBrewer_1.1-2 checkmate_1.8.2 colorspace_1.3-2 htmltools_0.3.5
## [17] Matrix_1.2-8 plyr_1.8.4 GSEABase_1.38.0 XML_3.98-1.6
## [21] pheatmap_1.0.8 biomaRt_2.32.0 genefilter_1.58.0 zlibbioc_1.22.0
## [25] xtable_1.8-2 GO.db_3.4.1 scales_0.4.1 brew_1.0-6
## [29] tibble_1.3.0 annotate_1.54.0 GenomicFeatures_1.28.0 lazyeval_0.2.0
## [33] survival_2.41-3 magrittr_1.5 memoise_1.1.0 evaluate_0.10
## [37] fail_1.3 nlme_3.1-131 hwriter_1.3.2 GOstats_2.42.0
## [41] graph_1.54.0 tools_3.4.0 BBmisc_1.11 stringr_1.2.0
## [45] sendmailR_1.2-1 munsell_0.4.3 locfit_1.5-9.1 AnnotationDbi_1.38.0
## [49] compiler_3.4.0 grid_3.4.0 RCurl_1.95-4.8 rjson_0.2.15
## [53] AnnotationForge_1.18.0 bitops_1.0-6 base64enc_0.1-3 rmarkdown_1.5
## [57] codetools_0.2-15 gtable_0.2.0 DBI_0.6-1 knitr_1.15.1
## [61] rtracklayer_1.36.0 rprojroot_1.2 stringi_1.1.5 BatchJobs_1.6
## [65] Rcpp_0.12.10
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