Overview
Introduction
Syllabus
Schedule
Schedule
Slides
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R Programming
Quarto & R Markdown
All Slides
Foundations
Course Introduction
Linux and HPC
Git and GitHub
DNA Sequencing
R Programming
Introduction to R
Programming in R
R on HPC
Graphics in R
Quarto & R Markdown
Data Analysis
Sequence Alignments
Multiple Alignments
Short Read Alignments
NGS Analysis Basics
Gene Expression Analysis
RNA-Seq Analysis Workflow
Functional Enrichment Analysis
ML/AI for Genomics
Cluster Analysis
AI as Tutor for Data Analysis
R Programming
Quarto & R Markdown
Quarto and R Markdown
📊 Quarto and R Markdown
Open slideshow
Open tutorial
Download HTML
Download .qmd
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Graphics in R
Sequence Alignments