Graduate Student in Genetics, Computer Science (UCR) ChemGen IGERT Fellow
Algorithm, cheminformatics and bioinformatics. My research interests include graph matching, machine learning, information retrieval, similarity measure of chemical compound, and ligand- and receptor-based virtual screening of chemical compound libraries.
Cao Y, Jiang T, Girke T (2010) Accelerated Similarity Searching and Clustering of Large Compound Sets by Geometric Embedding and Locality Sensitive. Bioinformatics: epub.
Cao Y, Charisi A, Cheng LC, Jiang T, Girke T (2008) ChemmineR: A Compound Mining Framework for R. Bioinformatics: 24, 1733-1734.
Cao Y, Jiang T, Girke T (2008) A maximum common substructure-based algorithm for searching and predicting drug-like compounds. Bioinformatics: 24, i366-374.
John J. Irwin, Brian K. Shoichet, Michael M. Mysinger, Niu Huang, Francesco Colizzi, Pascal Wassam, Yiqun Cao (2009) Automated Docking Screens: A Feasibility Study. J Med Chem 52(18).