Author: Daniela Cassol ( and Thomas Girke (

Last update: 18 April, 2020

Alternative formats of this tutorial: [ HTML ], [ PDF ], [ .Rmd ], [ .R ]

Users want to provide here background information about the design of their VAR-Seq project.

Background and objectives

This report describes the analysis of a VAR-Seq project studying the genetic differences among several strains … from organism ….

Experimental design

Typically, users want to specify here all information relevant for the analysis of their NGS study. This includes detailed descriptions of FASTQ files, experimental design, reference genome, gene annotations, etc.

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