## R Under development (unstable) (2020-03-31 r78116)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Ubuntu 20.04 LTS
##
## Matrix products: default
## BLAS: /usr/local/lib/R/lib/libRblas.so
## LAPACK: /usr/local/lib/R/lib/libRlapack.so
##
## locale:
## [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
## [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
## [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
## [7] LC_PAPER=en_US.UTF-8 LC_NAME=C
## [9] LC_ADDRESS=C LC_TELEPHONE=C
## [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
##
## attached base packages:
## [1] stats4 parallel stats graphics grDevices
## [6] utils datasets methods base
##
## other attached packages:
## [1] systemPipeR_1.21.6 ShortRead_1.45.4
## [3] GenomicAlignments_1.23.2 SummarizedExperiment_1.17.5
## [5] DelayedArray_0.13.12 matrixStats_0.56.0
## [7] Biobase_2.47.3 BiocParallel_1.21.2
## [9] Rsamtools_2.3.7 Biostrings_2.55.7
## [11] XVector_0.27.2 GenomicRanges_1.39.3
## [13] GenomeInfoDb_1.23.16 IRanges_2.21.8
## [15] S4Vectors_0.25.15 BiocGenerics_0.33.3
## [17] BiocStyle_2.15.6
##
## loaded via a namespace (and not attached):
## [1] colorspace_1.4-1 rjson_0.2.20
## [3] hwriter_1.3.2 ellipsis_0.3.0
## [5] bit64_0.9-7 AnnotationDbi_1.49.1
## [7] fansi_0.4.1 codetools_0.2-16
## [9] splines_4.1.0 knitr_1.28
## [11] annotate_1.65.1 GO.db_3.10.0
## [13] dbplyr_1.4.2 png_0.1-7
## [15] pheatmap_1.0.12 graph_1.65.2
## [17] BiocManager_1.30.10 compiler_4.1.0
## [19] httr_1.4.1 GOstats_2.53.0
## [21] backports_1.1.6 assertthat_0.2.1
## [23] Matrix_1.2-18 limma_3.43.6
## [25] cli_2.0.2 formatR_1.7
## [27] htmltools_0.4.0 prettyunits_1.1.1
## [29] tools_4.1.0 gtable_0.3.0
## [31] glue_1.4.0 GenomeInfoDbData_1.2.2
## [33] Category_2.53.1 dplyr_0.8.5
## [35] batchtools_0.9.13 rappdirs_0.3.1
## [37] Rcpp_1.0.4.6 vctrs_0.2.4
## [39] rtracklayer_1.47.0 xfun_0.13
## [41] stringr_1.4.0 lifecycle_0.2.0
## [43] XML_3.99-0.3 edgeR_3.29.1
## [45] zlibbioc_1.33.1 scales_1.1.0
## [47] BSgenome_1.55.4 VariantAnnotation_1.33.4
## [49] hms_0.5.3 RBGL_1.63.1
## [51] RColorBrewer_1.1-2 yaml_2.2.1
## [53] curl_4.3 memoise_1.1.0
## [55] ggplot2_3.3.0 biomaRt_2.43.5
## [57] latticeExtra_0.6-29 stringi_1.4.6
## [59] RSQLite_2.2.0 genefilter_1.69.0
## [61] checkmate_2.0.0 GenomicFeatures_1.39.7
## [63] rlang_0.4.5 pkgconfig_2.0.3
## [65] bitops_1.0-6 evaluate_0.14
## [67] lattice_0.20-40 purrr_0.3.3
## [69] bit_1.1-15.2 tidyselect_1.0.0
## [71] GSEABase_1.49.1 AnnotationForge_1.29.2
## [73] magrittr_1.5 bookdown_0.18
## [75] R6_2.4.1 base64url_1.4
## [77] DBI_1.1.0 pillar_1.4.3
## [79] withr_2.1.2 survival_3.1-11
## [81] RCurl_1.98-1.1 tibble_3.0.0
## [83] crayon_1.3.4 BiocFileCache_1.11.5
## [85] rmarkdown_2.1 jpeg_0.1-8.1
## [87] progress_1.2.2 locfit_1.5-9.4
## [89] grid_4.1.0 data.table_1.12.8
## [91] blob_1.2.1 Rgraphviz_2.31.0
## [93] digest_0.6.25 xtable_1.8-4
## [95] brew_1.0-6 openssl_1.4.1
## [97] munsell_0.5.0 askpass_1.1
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